species:   Drmel
pid:       MI0017740
parent:    dme-mir-4954
paralog:   
locus:     NC_004354.4:2029004-2029094
matures:   ['AUACCCGAGCCAUGAUAGAUUG', 'AUCGAUCGCGGUUCGAGUGCUCG']
srr:       SRR11906542
genome:    /Users/jax/+Genomes/Animal_genomes/Drmel.GCF_000001215.4_Release_6_plus_ISO1_MT_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Drmel.SRR11906542.cram NC_004354.4:2029004-2029094

0 out of bounds
4 alignments
4 proper strand
4 stranded perfect matches

              ************************         *************************                   
UUGGCGCUUGGAAUCGAUACCCGAGCCAUGAUAGAUUGAAGUCAACCCAAUCGAUCGCGGUUCGAGUGCUCGAGUCUUGUGCGCCGGCAUG
.((((((..(((.(((((((.((((((.((((.(((((.........))))).)))).)))))).))).)))).)))...)))))).....
----------------AUACCCGAGCCAUGAUAGAUUG----------------------------------------------------- l=22 a=2 c
-------------------------------------------------AUCGAUCGCGGUUCGAGUGCUCG------------------- l=23 a=0 c*
----------------AUACCCGAGCCAUGAUAGAUUG----------------------------------------------------- l=22 a=2 ma
-------------------------------------------------AUCGAUCGCGGUUCGAGUGCUCG------------------- l=23 a=0 ma*

----------------AUACCCGAGCCAUGAUAGAUU------------------------------------------------------ l=21 a=2 
----------------AUACCCGAGCCAUGAUAGAUUG----------------------------------------------------- l=22 a=2 (c,ma)

mb-01011
ax-1011111
ku-01
ss-111111111110
fn-011
